PUBLIC_RC1 V4 assessment
WI-38 — formal assessment
Entity LUNG-ENT-039 · assessment V4|LUNG-ENT-039|REPLICATE_LEVEL
The 13 legacy V1–V3 records remain separate from V4 replicate-level results. Downloads are temporarily unavailable while licensing and distribution metadata are finalized.
Assessment context
- Status
- FORMAL
- PR version
- V4
- Target assignment
- fibroblasts / PRTGT-005; accepted proxy with limitation
- Baseline classification
- WT PDL20 TP1 growth-stage context; accepted under prior user-reported final rule closure; not passage-neutral or untreated
- Replication rule
- REPLICATE_LEVEL
- Source
- GSE175533; author matrix RS_batch_tpms.txt; SHA256 2a0ea0369ac4f56059a9fb74d5290e5c48e28fcb01a2aeb0642cdf6bc38703d0
- Method and caveat
- Author TPM; exact symbol to GENCODE v29 ENSG subset (33137/33514 source rows retained); existing PR-only core; frozen HPA normal reference SHA256 93a9cddda40e886d2fd85136a531b4525bbb882cf24722091fe9dcf56fe831cc
Replicate-level results
Replicates are shown individually; no expression, rho, rank, or percentile aggregation is performed here.
| Sample | Replicate | Run | rho | Rank | Percentile | Delta rho | Shared genes |
|---|---|---|---|---|---|---|---|
| PDL20_TP1_A | PDL20_TP1_A | NOT_PROVIDED | 0.723631 | 10 | 94.118% | -0.0404616869 | 19726 |
| PDL20_TP1_B | PDL20_TP1_B | NOT_PROVIDED | 0.723590 | 10 | 94.118% | -0.0406920537 | 19726 |
| PDL20_TP1_C | PDL20_TP1_C | NOT_PROVIDED | 0.729496 | 10 | 94.118% | -0.0380696078 | 19726 |